STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0794Ribosomal protein L11 methyltransferase. (287 aa)    
Predicted Functional Partners:
rplK
Ribosomal protein L11.
    
 
 0.891
EIO_0793
Peptide methionine sulfoxide reductase.
       0.800
EIO_0578
Conserved hypothetical protein.
  
  
 0.782
EIO_1743
Chaperone protein DnaJ, putative.
 
  
 0.768
EIO_2840
Chaperone protein DnaJ.
  
  
 0.684
EIO_0626
Ribosomal RNA large subunit methyltransferase H.
 
   
 0.678
EIO_0224
Conserved hypothetical protein.
 
      0.639
EIO_0792
Primosomal protein N', putative.
       0.557
EIO_0791
Alpha/beta fold family hydrolase/acetyltransferase-like protein.
  
    0.540
EIO_0580
Glutamate/cysteine ligase.
  
   
 0.522
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.