STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_08336-phosphogluconate dehydrogenase. (160 aa)    
Predicted Functional Partners:
EIO_0834
6-phosphogluconate dehydrogenase.
  
  0.999
idnK
Gluconate kinase.
   
 0.991
rpe
Ribulose-phosphate 3-epimerase.
   
 0.933
EIO_1651
6-phosphogluconolactonase.
  
 
 0.924
EIO_0823
Ribose-5-phosphate isomerase A.
   
 
 0.922
EIO_1652
Glucose-6-phosphate 1-dehydrogenase.
 
 
 0.836
EIO_2112
Transketolase.
  
 
 0.835
EIO_0302
2-deoxy-D-gluconate 3-dehydrogenase.
  
 0.814
EIO_1771
Putative translaldolase.
  
 
 0.813
EIO_2430
Glutamine-pyruvate aminotransferase.
      
 0.616
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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