Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIO_08346-phosphogluconate dehydrogenase. (306 aa)    
Predicted Functional Partners:
EIO_0833
6-phosphogluconate dehydrogenase.
  
  0.999
idnK
Gluconate kinase.
  
 0.991
EIO_1652
Glucose-6-phosphate 1-dehydrogenase.
 
 0.989
rpe
Ribulose-phosphate 3-epimerase.
   
 0.938
EIO_1651
6-phosphogluconolactonase.
 
 
 0.936
EIO_0823
Ribose-5-phosphate isomerase A.
   
 
 0.921
EIO_2112
Transketolase.
  
 
 0.885
EIO_0302
2-deoxy-D-gluconate 3-dehydrogenase.
  
  0.813
EIO_1771
Putative translaldolase.
  
 
 0.804
pgk
Phosphoglycerate kinase.
   
 
 0.582
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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