STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0841Glyoxylate reductase. (317 aa)    
Predicted Functional Partners:
EIO_1613
Hydroxypyruvate reductase.
 
 0.945
EIO_2210
Elongation factor P.
 
 
 0.929
EIO_1737
Malate synthase G.
  
 
 0.910
gph
Phosphoglycolate phosphatase.
    
  0.901
EIO_2564
HAD-superfamily hydrolase, subfamily IA, variant 1.
    
  0.901
EIO_0974
Ureidoglycolate hydrolase.
     
  0.800
EIO_0004
Phosphoserine aminotransferase.
 
   
 0.736
csaA
Export-related chaperone CsaA.
  
    0.720
proC
Pyrroline-5-carboxylate reductase.
  
  
 0.691
EIO_0838
Conserved hypothetical protein.
       0.521
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.