STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolELipoprotein releasing system transmembrane protein LolE. (428 aa)    
Predicted Functional Partners:
lolD
ABC lipoprotein efflux transporter, ATPase subunit, LolD.
 0.999
EIO_0670
Conserved hypothetical protein.
  
 0.950
EIO_2789
Twin-arginine translocation pathway signal.
 
 
 
 0.905
proS
prolyl-tRNA synthetase.
   
 
 0.779
EIO_0842
Thymidine kinase.
       0.763
EIO_0843
Cytochrome c family protein.
       0.752
EIO_1564
Putative outer membrane protein.
 
   
 0.725
EIO_1304
Nitrogen regulation protein NtrY.
 
    0.698
EIO_2136
OmpA/MotB family protein.
  
 
 
 0.670
EIO_2140
MotA/TolQ/ExbB proton channel.
 
    0.643
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.