STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0848DnaA-like protein. (223 aa)    
Predicted Functional Partners:
EIO_0847
Lipocalin-related protein and Bos/Can/Equ allergen.
  
 0.967
EIO_2386
DNA polymerase III, beta subunit.
 
 0.960
EIO_2032
DNA polymerase III subunit beta.
  
 0.954
dnaB
Replicative DNA helicase.
 
 
 0.877
ppk
Polyphosphate kinase.
     
 0.752
EIO_0081
Ribosomal protein L31.
  
    0.703
proS
prolyl-tRNA synthetase.
       0.683
recO
DNA repair protein RecO.
  
  
 0.667
recF
Recombination protein F.
 
  
 0.634
EIO_2362
Ribosomal protein L36.
   
    0.618
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.