Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0863Protease, putative. (190 aa)    
Predicted Functional Partners:
EIO_2770
ATP-binding protein.
 
 0.996
EIO_2681
O-sialoglycoprotein endopeptidase, putative.
 
 0.986
EIO_0862
Ribosomal-protein-alanine acetyltransferase, putative.
  
 
 0.903
EIO_0864
NifU domain protein.
     
 0.854
EIO_0361
Phage SPO1 DNA polymerase-related protein.
  
    0.616
EIO_2267
biotin--acetyl-CoA-carboxylase ligase.
  
    0.588
EIO_0861
Putative sugar ABC transporter, periplasmic sugar-binding protein.
       0.550
EIO_2123
Cytidine and deoxycytidylate deaminase family protein.
 
  
 0.548
EIO_0574
Sua5/YciO/YrdC family protein.
 
   
 0.528
EIO_0859
Putative sugar ABC transporter, permease protein.
       0.520
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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