STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0884Glutathione S-transferase. (314 aa)    
Predicted Functional Partners:
EIO_0883
Putative ring-cleavage extradiol dioxygenase.
       0.779
ureE
Urease accessory protein UreE.
       0.515
ureG
Urease accessory protein UreG.
       0.515
EIO_0881
2-dehydro-3-deoxygalactonokinase.
       0.515
EIO_0882
Transcriptional regulator.
       0.515
ureC
Urease, alpha subunit.
       0.514
ureB
Urease, beta subunit.
       0.498
ureD
Urease accessory protein UreD.
       0.483
ureA
Urease, gamma subunit.
       0.483
EIO_0651
Putative acyl carrier protein phosphodiesterase.
    
 0.455
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.