STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0885Aminotransferase. (455 aa)    
Predicted Functional Partners:
ald
Aldehyde dehydrogenase family protein, putative.
   
 0.804
EIO_2382
Aldehyde dehydrogenase.
   
 0.804
EIO_0979
Taurine--pyruvate aminotransferase.
  
     0.603
EIO_1643
ABC polyamine transporter, periplasmic substrate-binding protein.
 
    0.571
EIO_0886
UDP-glucose 4-epimerase.
     
 0.524
EIO_1198
5-aminolevulinate synthase.
 
  
 0.481
EIO_0647
Riboflavin biosynthesis protein RibD.
     
 0.449
EIO_0752
Glutamine synthetase family protein.
    0.442
nadE
Glutamine-dependent NAD(+) synthetase.
   
 
 0.441
ordL
Oxidoreductase ordL.
 
    0.415
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.