STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0893Glutathione-dependent formaldehyde-activating, GFA. (141 aa)    
Predicted Functional Partners:
EIO_0415
Glutathione-dependent formaldehyde-activating, GFA.
  
     0.773
EIO_0892
Acetyltransferase, GNAT family.
       0.732
EIO_2430
Glutamine-pyruvate aminotransferase.
     
 0.587
EIO_0890
Conserved hypothetical protein.
       0.550
dnaX
DNA polymerase III, subunits gamma and tau.
       0.549
recR
Recombination protein RecR.
       0.547
EIO_0894
HAD-superfamily hydrolase, subfamily IA, variant 3.
       0.461
EIO_0895
Probable glutathione S-transferase family protein.
       0.455
EIO_0896
Conserved hypothetical protein.
 
     0.409
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.