Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0894HAD-superfamily hydrolase, subfamily IA, variant 3. (219 aa)    
Predicted Functional Partners:
EIO_1015
tRNA (guanine-N(7)-)-methyltransferase.
    
  0.786
EIO_0895
Probable glutathione S-transferase family protein.
   
   0.759
EIO_0896
Conserved hypothetical protein.
       0.512
EIO_1868
Alpha amylase catalytic region.
  
  
 0.476
EIO_0893
Glutathione-dependent formaldehyde-activating, GFA.
       0.461
guaA
GMP synthase.
  
  
 0.455
EIO_0892
Acetyltransferase, GNAT family.
       0.440
metH
Probable 5-methyltetrahydrofolate--homocysteine methyltransferase.
  
    0.432
EIO_2210
Elongation factor P.
     
 0.427
EIO_0444
Efflux transporter.
  
    0.422
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.