STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yejAOligopeptide/dipeptide uptake family ABC transporter, periplasmic substrate-binding protein. (638 aa)    
Predicted Functional Partners:
EIO_0900
ABC peptide transporter, inner membrane subunit.
 
 0.960
EIO_0901
Oligopeptide/dipeptide uptake family ABC transporter, permease protein.
 
 
 0.924
EIO_0903
ABC peptide transporter, fused ATPase domains.
 
  
  0.841
EIO_0755
His/Glu/Gln/Arg/opine family ABC transporter, permease protein.
   
 
 0.798
EIO_2560
Glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztC.
   
 
 0.798
EIO_1019
ABC transporter, ATPase subunit.
     
 0.797
EIO_0554
ABC transporter, permease protein.
     
  0.794
EIO_0756
Binding-protein-dependent transport systems inner membrane component.
     
  0.794
EIO_1678
Putative permease, YjgP/YjgQ family.
     
  0.794
EIO_1679
Putative permease.
     
  0.794
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.