STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0908ATP-dependent Clp protease adaptor protein clpS. (117 aa)    
Predicted Functional Partners:
EIO_0925
ATP-dependent Clp protease, ATP-binding subunit clpA.
 
 
 0.975
EIO_0011
Chaperone protein clpB.
  
 
 0.910
rsmC
Ribosomal RNA small subunit methyltransferase C RsmC.
       0.845
EIO_1752
Possible leucyl/phenylalanyl-tRNA--protein transferase.
 
  
 0.825
EIO_0907
Predicted hydrolase (haloacid dehalogenase (HAD) superfamily protein).
       0.717
EIO_1382
Histone-like DNA-binding protein (IHF).
   
  
 0.592
EIO_0906
Probable penicillin-binding protein.
       0.517
EIO_1184
arginyl-tRNA-protein transferase.
  
  
 0.483
EIO_2765
ATP-dependent HslUV protease.
      
 0.449
EIO_2121
Conserved hypothetical protein.
      
 0.438
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.