STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0934Ribose-phosphate pyrophosphokinase. (339 aa)    
Predicted Functional Partners:
pdhB
Pyruvate dehydrogenase subunit beta.
  
 0.999
glmU
UDP-N-acetylglucosamine pyrophosphorylase.
  
 0.986
EIO_2112
Transketolase.
   
 
 0.952
purF
Amidophosphoribosyltransferase.
  
 0.938
EIO_0823
Ribose-5-phosphate isomerase A.
  
 
 0.931
rbsK
Ribokinase.
  
 0.925
EIO_2167
Phosphopentomutase.
     
 0.916
pgm
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I.
   
 
 0.908
trgB
Tellurite resistance protein TrgB.
  
 
 0.905
pyrE
Orotate phosphoribosyltransferase.
  
 
 0.865
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.