STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0935Threonine aldolase, low-specificity. (346 aa)    
Predicted Functional Partners:
EIO_1627
Glycine dehydrogenase.
    
 0.969
glyA
Serine hydroxymethyltransferase.
   
 0.934
EIO_0774
L-threonine synthase.
  
 0.927
EIO_2210
Elongation factor P.
    
 0.925
EIO_1198
5-aminolevulinate synthase.
  
 
 0.920
EIO_0101
Threonine dehydratase.
  
 
 0.917
EIO_2737
Threonine dehydratase.
  
 
 0.917
ribF
Riboflavin biosynthesis protein RibF.
     
 0.873
EIO_0936
Conserved hypothetical protein.
       0.845
EIO_0938
Conserved hypothetical protein.
       0.639
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.