Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
groELChaperonin GroEL. (547 aa)    
Predicted Functional Partners:
groES
groES protein.
 0.999
EIO_2841
Chaperone protein DnaK.
 
 0.998
EIO_0707
Conserved hypothetical protein.
   
 0.993
grpE
GrpE protein HSP-70 cofactor, putative.
 
 0.991
EIO_2840
Chaperone protein DnaJ.
 
 0.986
pdhB
Pyruvate dehydrogenase subunit beta.
  
 0.948
EIO_1408
ATP-dependent protease La.
  
 0.942
EIO_1743
Chaperone protein DnaJ, putative.
  
 0.932
EIO_0692
RNA polymerase, sigma 32 subunit, RpoH.
  
 
 0.927
EIO_2598
Elongation factor G.
  
 0.919
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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