Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0953Thioredoxin reductase. (313 aa)    
Predicted Functional Partners:
EIO_2767
Thioredoxin.
 
 0.986
EIO_1459
Aminotransferase, class-V.
 
 
  0.915
EIO_0652
DNA-binding protein transcriptional activator, 3HPP-binding protein.
  
 
  0.904
EIO_2384
Thiol-specific antioxidant protein.
  
 
 0.829
EIO_0320
Thioredoxin.
  
 
 0.800
EIO_2725
Glutaredoxin.
  
 
 0.750
EIO_0828
Ferredoxin.
   
 
 0.727
EIO_0952
Hypothetical protein.
       0.594
EIO_2479
Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein.
     
 0.578
EIO_0596
Thiol:disulfide interchange protein tlpA, putative.
  
 
 0.567
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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