STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0953Thioredoxin reductase. (313 aa)    
Predicted Functional Partners:
EIO_2767
Thioredoxin.
 
 0.992
EIO_1459
Aminotransferase, class-V.
 
 
  0.914
EIO_0652
DNA-binding protein transcriptional activator, 3HPP-binding protein.
  
 
  0.903
EIO_0320
Thioredoxin.
  
 
 0.877
EIO_2384
Thiol-specific antioxidant protein.
  
 
 0.875
EIO_0828
Ferredoxin.
   
 
 0.800
EIO_2416
Conserved hypothetical protein.
  
 
 0.791
EIO_2725
Glutaredoxin.
  
 
 0.737
EIO_0692
RNA polymerase, sigma 32 subunit, RpoH.
  
 
 0.654
metG
methionyl-tRNA synthetase.
 
  
 0.622
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.