STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0956Conserved hypothetical protein. (351 aa)    
Predicted Functional Partners:
EIO_2274
NADH dehydrogenase subunit I.
 
  
 0.929
nuoD
NADH dehydrogenase I, D subunit.
 
 
 0.912
EIO_0955
Conserved hypothetical protein.
      0.878
EIO_2283
NADH dehydrogenase subunit C.
 
 
 0.858
EIO_2284
NADH-quinone oxidoreductase, B subunit.
 
 
 0.857
EIO_2276
NADH dehydrogenase (quinone), g subunit.
 
 
  0.828
lgt
Prolipoprotein diacylglyceryl transferase.
 
     0.818
EIO_2434
3-beta hydroxysteroid dehydrogenase/isomerase.
  
  
  0.803
EIO_1072
Conserved hypothetical protein.
  
  
 0.789
EIO_2727
Methyltransferase.
  
    0.747
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.