Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lgtProlipoprotein diacylglyceryl transferase. (272 aa)    
Predicted Functional Partners:
EIO_0732
Tryptophan synthase, alpha subunit.
  
    0.918
EIO_0728
Tryptophan synthase subunit beta.
  
    0.884
EIO_0956
Conserved hypothetical protein.
 
     0.816
oxaA
Inner membrane protein oxaA, putative.
 
  
 0.784
EIO_0958
Conserved hypothetical protein.
 
     0.746
EIO_0955
Conserved hypothetical protein.
 
     0.736
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)+).
  
    0.621
EIO_0577
4-hydroxybenzoate polyprenyl transferase.
  
    0.614
EIO_0219
Putative kinase/phosphatase.
  
  
 0.608
EIO_2374
Lipoprotein signal peptidase.
 
   
 0.605
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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