STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0964ABC transporter, nucleotide binding/ATPase protein. (261 aa)    
Predicted Functional Partners:
EIO_0965
ABC transporter, membrane spanning protein.
  
 0.997
EIO_0966
Ferric anguibactin transport system permease protein FATD.
 
  
 0.994
EIO_0967
ABC transporter, substrate binding protein.
 
  
 0.992
EIO_0439
Periplasmic binding protein.
 
  
 0.692
EIO_0437
Periplasmic binding protein.
 
  
 0.569
EIO_0436
ABC transporter substrate-binding protein.
 
  
 0.548
EIO_0165
Hemin degrading factor.
 
      0.540
EIO_0968
Probable bacterioferritin-associated ferredoxin.
       0.415
EIO_0969
Bacterioferritin.
       0.415
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.