Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1003GSPII_E N-terminal domain family. (545 aa)    
Predicted Functional Partners:
parA
Chromosome partitioning protein ParA.
  
 
 0.856
EIO_0818
Tetratricopeptide TPR_2 repeat protein.
  
 
 0.804
carA
Carbamoyl-phosphate synthase, small subunit.
       0.733
motA
Flagellar motor protein MotA.
  
  
 0.727
radC
DNA repair protein RadC.
  
    0.629
EIO_0076
Chromosome partitioning protein.
  
 
 0.592
EIO_1005
GatB/YqeY.
       0.559
dprA
DNA processing protein DprA, putative.
  
    0.553
fliP
Flagellar biosynthesis protein FliP.
   
  
 0.546
EIO_1033
GGDEF domain protein.
 
  
 0.545
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.