STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1011ABC transporter, ATP-binding protein. (231 aa)    
Predicted Functional Partners:
EIO_1012
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.953
EIO_1013
ABC transporter, permease protein, putative.
 
  0.921
EIO_1010
Dihydropyrimidinase.
     0.916
EIO_1014
ABC transporter, periplasmic substrate-binding protein.
 
 
  0.913
EIO_1577
Binding-protein-dependent transport systems inner membrane component.
 
 0.834
EIO_2645
Binding-protein-dependent transport systems inner membrane component.
 
 0.677
EIO_1663
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  0.672
amaB
N-carbamoyl-beta-alanine amidohydrolase protein.
 
     0.662
EIO_1007
TetR family transcriptional regulator.
 
     0.630
EIO_1422
ABC transporter, inner membrane subunit.
 
 0.619
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.