Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EIO_1012Binding-protein-dependent transport systems inner membrane component. (313 aa)    
Predicted Functional Partners:
EIO_1011
ABC transporter, ATP-binding protein.
 
 0.957
EIO_1014
ABC transporter, periplasmic substrate-binding protein.
 
  0.930
EIO_1010
Dihydropyrimidinase.
 
     0.871
EIO_0145
Twin-arginine translocation pathway signal.
 
  0.824
EIO_1664
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 0.803
EIO_1579
Conserved hypothetical protein.
 
  0.776
EIO_2067
ABC transporter related protein.
 
 0.725
EIO_1665
NMT1/THI5 like domain protein.
 
  0.651
EIO_1824
Probable nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding protein.
 
  0.650
EIO_1576
ABC transporter ATP-binding protein.
 
 0.646
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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