STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1016Cytidylate kinase. (202 aa)    
Predicted Functional Partners:
EIO_0544
3-phosphoshikimate 1-carboxyvinyltransferase protein.
 
  
 0.951
rpsA
30S ribosomal protein S1.
  
 0.951
ndk
Nucleoside diphosphate kinase.
  
 
 0.939
EIO_1193
5'-nucleotidase surE.
    
 0.929
EIO_1622
Ribonucleoside-diphosphate reductase, beta subunit.
    
 0.929
EIO_1621
Ribonucleoside-diphosphate reductase, alpha subunit.
  
 
 0.924
mazG
MazG family protein.
    
  0.901
EIO_2033
Conserved hypothetical protein.
     
  0.900
EIO_2156
Ser/Thr protein phosphatase/nucleotidase, putative.
     
  0.900
EIO_0915
Cyclohexadienyl dehydrogenase.
 
  
 0.893
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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