STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metGmethionyl-tRNA synthetase. (569 aa)    
Predicted Functional Partners:
leuS
leucyl-tRNA synthetase.
  
 0.988
ileS
isoleucyl-tRNA synthetase.
  
 0.982
EIO_2263
arginyl-tRNA synthetase.
  
 0.980
proS
prolyl-tRNA synthetase.
  
 0.973
EIO_0867
glutamyl-tRNA synthetase.
  
 0.942
EIO_2098
glutamyl-tRNA synthetase.
  
 0.940
EIO_1550
glutamyl-tRNA synthetase, class Ic.
  
 0.934
EIO_0614
methionyl-tRNA formyltransferase.
     
 0.931
metH
Probable 5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
 0.915
EIO_2303
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
     
 0.901
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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