STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1034Conserved hypothetical protein. (99 aa)    
Predicted Functional Partners:
EIO_1033
GGDEF domain protein.
       0.719
EIO_0725
Conserved hypothetical protein.
  
     0.633
ispZ
Intracellular septation protein, putative.
 
     0.626
EIO_1170
Septum formation initiator.
  
     0.592
EIO_2217
Conserved hypothetical protein.
  
     0.587
EIO_0551
ATPase.
  
     0.583
EIO_0990
Conserved hypothetical protein.
  
     0.568
EIO_2110
Conserved hypothetical protein.
  
     0.562
EIO_1035
Signal recognition particle-docking protein FtsY.
       0.559
EIO_0854
Rhomboid family protein.
  
     0.538
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.