Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1126ABC-2 type transporter. (270 aa)    
Predicted Functional Partners:
EIO_1127
Daunorubicin resistance ABC transporter ATPase subunit.
 
 
 0.953
EIO_2644
Daunorubicin resistance ABC transporter ATPase subunit.
 
 
 0.873
EIO_1125
Extracellular solute-binding protein.
 
  
  0.854
EIO_1904
ABC-type spermidine/putrescine transport systems ATPase components.
  
 
 0.840
EIO_1124
Putative membrane-associated peptidase.
 
    0.802
EIO_2688
ABC transporter, ATP-binding protein.
    
  0.798
EIO_0554
ABC transporter, permease protein.
     
  0.794
EIO_0755
His/Glu/Gln/Arg/opine family ABC transporter, permease protein.
     
  0.794
EIO_0756
Binding-protein-dependent transport systems inner membrane component.
     
  0.794
EIO_1019
ABC transporter, ATPase subunit.
     
  0.794
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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