STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1129Pyrrolo-quinoline quinone. (314 aa)    
Predicted Functional Partners:
EIO_1128
Pyrrolo-quinoline quinone.
     0.994
pqqB
Pyrroloquinoline quinone biosynthesis protein PqqB.
 
  
 0.782
pqqC
Pyrroloquinoline quinone biosynthesis protein PqqC.
 
  
 0.777
pqqE
Pyrroloquinoline quinone biosynthesis protein PqqE.
 
  
 0.754
EIO_0680
Pyrrolo-quinoline quinone.
  
     0.739
EIO_1126
ABC-2 type transporter.
 
     0.729
pqqD
Coenzyme PQQ synthesis protein D (pyrroloquinoline quinone biosynthesis protein D)(PqqD).
 
  
 0.673
EIO_1130
Conserved hypothetical protein.
  
  
 0.606
EIO_2635
Cytochrome c551.
 
     0.545
EIO_1125
Extracellular solute-binding protein.
 
  
 0.520
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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