STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1191LysM domain protein. (391 aa)    
Predicted Functional Partners:
EIO_1193
5'-nucleotidase surE.
 
  
 0.826
EIO_1192
protein-L-isoaspartate O-methyltransferase.
     
 0.815
EIO_1190
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.722
mrcA
Penicillin-binding protein 1A.
 
   
 0.568
mrcB
Glycosyl transferase family protein.
  
   
 0.552
EIO_1195
CvpA family protein.
 
     0.518
ftsE
Cell division ATP-binding protein FtsE.
 
   
 0.498
EIO_0854
Rhomboid family protein.
 
     0.496
amiC
Probable N-acetylmuramoyl-L-alanine amidase.
 
  
 0.489
purF
Amidophosphoribosyltransferase.
       0.488
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.