STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1195CvpA family protein. (203 aa)    
Predicted Functional Partners:
purF
Amidophosphoribosyltransferase.
  
  
 0.955
EIO_1090
Phosphoribosylaminoimidazole-succinocarboxamide synthase.
  
    0.837
EIO_1281
Phosphoribosylaminoimidazole synthetase.
   
    0.816
radA
DNA repair protein RadA.
       0.807
EIO_0948
Phosphoribosylaminoimidazole carboxylase, catalytic subunit.
   
    0.782
purQ
Phosphoribosylformylglycinamidine synthase I.
   
    0.767
EIO_2107
Phosphoribosylformylglycinamidine synthase II.
   
    0.755
EIO_2110
Conserved hypothetical protein.
 
  
 0.600
EIO_1197
Peptidase M20.
       0.598
EIO_1282
Phosphoribosylglycinamide formyltransferase.
   
  
 0.597
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.