STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1199Conserved hypothetical protein. (402 aa)    
Predicted Functional Partners:
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase.
  
    0.868
mreB
Rod shape-determining protein MreB.
  
 
 0.856
EIO_0800
Cell shape determining protein, MreB/Mrl family.
  
 
 0.856
EIO_0558
Phosphatidylglycerol phosphate synthase.
  
    0.838
EIO_2706
Translocase.
  
 
 0.836
rplV
Ribosomal protein L22.
    
   0.799
rplW
Ribosomal protein L23.
    
 
 0.799
mreC
Rod shape-determining protein MreC.
 
 
 
 0.789
EIO_0551
ATPase.
  
  
 0.781
EIO_2217
Conserved hypothetical protein.
  
     0.771
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.