STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1297Competence/damage-inducible protein CinA domain protein. (111 aa)    
Predicted Functional Partners:
nadD
Nicotinic acid mononucleotide adenylyltransferase.
  
 
 0.942
EIO_2855
Nicotinate phosphoribosyltransferase.
  
 
 0.929
mazG
MazG family protein.
  
  
  0.915
EIO_1193
5'-nucleotidase surE.
    
  0.904
EIO_2156
Ser/Thr protein phosphatase/nucleotidase, putative.
   
 
  0.903
recA
Recombinase A.
  
 0.867
EIO_1298
Phosphatidylglycerophosphatase, putative.
       0.845
EIO_1299
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/ 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase.
       0.845
EIO_0489
Molybdenum cofactor biosynthesis domain protein.
   
 0.752
EIO_1301
tRNA-dihydrouridine synthase, putative.
       0.728
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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