STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntrBNitrogen regulation protein NtrB. (370 aa)    
Predicted Functional Partners:
EIO_1303
Two component, sigma54 specific, transcriptional regulator, Fis family protein.
 0.998
EIO_0501
Nitrogen regulatory protein P-II.
  
 0.986
glnB-1
Nitrogen regulatory protein P-II.
  
 0.986
EIO_1301
tRNA-dihydrouridine synthase, putative.
  
  
 0.926
ntrX
Nitrogen assimilation regulatory protein NtrX.
 
 0.899
EIO_1095
C4-dicarboxylate transport transcriptional regulatory protein DctD.
 
 0.800
EIO_1304
Nitrogen regulation protein NtrY.
 
   
0.787
EIO_1300
Hypothetical protein.
       0.762
EIO_1357
Probable two-component sensor histidine kinase.
  
   
 0.756
EIO_0502
Probable ammonium transporter, marine subtype.
  
 
 0.740
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.