STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1314Hydrophobe/amphiphile efflux-1 (HAE1) family protein. (1036 aa)    
Predicted Functional Partners:
EIO_1315
RND family efflux transporter MFP subunit.
 0.998
EIO_0343
Solvent efflux pump periplasmic linker srpA.
 0.993
EIO_1313
Nodulation protein T.
 0.982
EIO_1711
NolF secretion protein.
 0.981
EIO_0336
Outer membrane efflux protein.
 
 0.953
EIO_0342
Aminoglycoside efflux pump.
  
  
 
0.902
EIO_0532
Protein secretion protein.
 
 0.872
EIO_0533
Secretion protein HlyD.
 
 0.846
EIO_0579
Conserved hypothetical protein.
    
 0.638
hlyD
Type I secretion membrane fusion protein, HlyD.
  
 0.609
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.