Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIO_1330N-carbamyl-D-amino acid amidohydrolase. (196 aa)    
Predicted Functional Partners:
EIO_1329
N-carbamyl-D-amino acid amidohydrolase.
     0.994
ade
Adenine deaminase.
       0.773
EIO_1327
Alanine racemase domain protein.
       0.773
EIO_1328
Transcriptional regulator.
       0.773
potA
Spermidine/putrescine ABC transporter.
       0.773
EIO_1332
Binding-protein-dependent transport systems inner membrane component.
       0.773
EIO_1333
Binding-protein-dependent transport systems inner membrane component.
       0.773
EIO_1334
Extracellular solute-binding protein family 1.
       0.773
EIO_1336
Putative lipoprotein.
   
   0.519
EIO_1335
SCO1/2 family protein.
       0.495
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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