STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1349Branched-chain amino acid ABC transporter, permease protein. (447 aa)    
Predicted Functional Partners:
EIO_1350
ABC branched-chain amino acid transporter family, inner membrane subunit.
 
 0.999
EIO_1352
ABC transporter related protein.
 
 0.999
EIO_1351
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
 0.998
EIO_1353
Branched-chain amino acid ABC transporter, periplasmic substrate-binding protein.
 
 
 0.997
EIO_1921
Inner-membrane translocator.
 
 
 0.997
EIO_1918
ABC transporter related protein.
 
 0.994
EIO_1919
ABC transporter related protein.
 
 0.993
EIO_1922
Twin-arginine translocation pathway signal.
 
 
 0.985
EIO_1920
Inner-membrane translocator.
  
  
  0.961
EIO_2353
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
 
 0.853
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.