Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EIO_1446Amidase. (462 aa)    
Predicted Functional Partners:
gatB
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B.
 0.998
gatC
glutamyl-tRNA(Gln) amidotransferase subunit C.
 
 0.997
EIO_2785
Amidase.
  
  
 
0.928
gatA
glutamyl-tRNA amidotransferase subunit A.
  
  
 
0.927
EIO_1929
Amidase.
  
  
 
0.925
EIO_1445
Putative beta-glucosidase.
       0.773
EIO_1447
Oligopeptide/dipeptide ABC transporter ATP-binding protein.
  
    0.699
EIO_1448
Oligopeptide/dipeptide ABC transporter ATP-binding protein.
       0.697
EIO_1449
Peptide ABC transporter permease protein.
  
    0.697
EIO_1450
ABC transporter membrane spanning protein (oligopeptide).
       0.697
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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