Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
alaSalanyl-tRNA synthetase. (868 aa)    
Predicted Functional Partners:
recA
Recombinase A.
 
 0.968
EIO_0692
RNA polymerase, sigma 32 subunit, RpoH.
  
 0.959
EIO_0818
Tetratricopeptide TPR_2 repeat protein.
   
 0.950
pheT
phenylalanyl-tRNA synthetase, beta subunit.
 
 
 0.895
valS
valyl-tRNA synthetase.
 
  
 0.891
aspS
aspartyl-tRNA synthetase.
 
  
 0.873
pyrG
CTP synthetase.
   
 
 0.857
leuS
leucyl-tRNA synthetase.
 
 
 0.817
eno
Enolase.
  
 
  0.810
ileS
isoleucyl-tRNA synthetase.
 
 
 0.803
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.