Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1502Peptide ABC transporter, permease protein. (269 aa)    
Predicted Functional Partners:
EIO_1500
ABC transporter, nucleotide binding/ATPase protein (oligopeptide).
  0.977
EIO_1501
ABC transporter, ATP-binding protein.
  0.972
EIO_1447
Oligopeptide/dipeptide ABC transporter ATP-binding protein.
  0.927
EIO_0280
ABC transporter related protein.
 
  0.925
EIO_1503
Binding-protein-dependent transport systems inner membrane component.
 
  0.925
EIO_0292
ABC transporter ATP-binding component.
  0.923
EIO_0279
Putative ATP-binding component of ABC transporter.
  0.922
EIO_1482
Oligopeptide ABC transporter ATP binding protein.
  0.903
EIO_0785
Oligopeptide ABC transporter ATP-binding protein.
 
  0.901
EIO_1504
ABC transporter, substrate binding protein (oligopeptide).
  0.893
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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