Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1579Conserved hypothetical protein. (327 aa)    
Predicted Functional Partners:
EIO_0539
ABC transporter, inner membrane subunit.
 
  0.847
EIO_1826
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
  0.841
EIO_2068
Binding-protein-dependent transport systems inner membrane component.
 
  0.839
EIO_1577
Binding-protein-dependent transport systems inner membrane component.
 
  0.833
EIO_1663
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  0.811
EIO_0147
Binding-protein-dependent transport systems inner membrane component.
 
  0.783
EIO_1012
Binding-protein-dependent transport systems inner membrane component.
 
  0.776
EIO_0148
Binding-protein-dependent transport systems inner membrane component.
 
  0.774
EIO_0145
Twin-arginine translocation pathway signal.
  
     0.764
EIO_1013
ABC transporter, permease protein, putative.
 
  0.753
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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