STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1602Putative solute-binding component of ABC transporter. (275 aa)    
Predicted Functional Partners:
potC
Spermidine/putrescine ABC transporter.
 
 0.997
EIO_0660
ABC transporter permease.
 
 0.991
EIO_1332
Binding-protein-dependent transport systems inner membrane component.
 
 0.991
EIO_1692
ABC spermidine/putrescine transporter, inner membrane subunit.
 
 0.990
EIO_1600
ABC transporter related protein.
 0.977
EIO_1603
Extracellular solute-binding protein family 1.
 
 
 0.960
EIO_1334
Extracellular solute-binding protein family 1.
 
 
 0.907
EIO_0662
Extracellular solute-binding protein.
 
 
 0.896
EIO_1691
ABC spermidine/putrescine transporter, ATPase subunit.
 0.881
potA
Spermidine/putrescine ABC transporter.
 0.870
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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