Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EIO_0401 | nrdI | EIO_0401 | EIO_1620 | Putative effector of murein hydrolase LrgA; COG1380. | nrdI protein. | 0.429 |
EIO_1619 | EIO_1621 | EIO_1619 | EIO_1621 | Glutaredoxin. | Ribonucleoside-diphosphate reductase, alpha subunit. | 0.989 |
EIO_1619 | EIO_1622 | EIO_1619 | EIO_1622 | Glutaredoxin. | Ribonucleoside-diphosphate reductase, beta subunit. | 0.944 |
EIO_1619 | EIO_1623 | EIO_1619 | EIO_1623 | Glutaredoxin. | Putative transmembrane protein. | 0.532 |
EIO_1619 | nrdI | EIO_1619 | EIO_1620 | Glutaredoxin. | nrdI protein. | 0.988 |
EIO_1621 | EIO_1619 | EIO_1621 | EIO_1619 | Ribonucleoside-diphosphate reductase, alpha subunit. | Glutaredoxin. | 0.989 |
EIO_1621 | EIO_1622 | EIO_1621 | EIO_1622 | Ribonucleoside-diphosphate reductase, alpha subunit. | Ribonucleoside-diphosphate reductase, beta subunit. | 0.999 |
EIO_1621 | EIO_1623 | EIO_1621 | EIO_1623 | Ribonucleoside-diphosphate reductase, alpha subunit. | Putative transmembrane protein. | 0.769 |
EIO_1621 | EIO_2725 | EIO_1621 | EIO_2725 | Ribonucleoside-diphosphate reductase, alpha subunit. | Glutaredoxin. | 0.917 |
EIO_1621 | nrdI | EIO_1621 | EIO_1620 | Ribonucleoside-diphosphate reductase, alpha subunit. | nrdI protein. | 0.993 |
EIO_1622 | EIO_1619 | EIO_1622 | EIO_1619 | Ribonucleoside-diphosphate reductase, beta subunit. | Glutaredoxin. | 0.944 |
EIO_1622 | EIO_1621 | EIO_1622 | EIO_1621 | Ribonucleoside-diphosphate reductase, beta subunit. | Ribonucleoside-diphosphate reductase, alpha subunit. | 0.999 |
EIO_1622 | EIO_1623 | EIO_1622 | EIO_1623 | Ribonucleoside-diphosphate reductase, beta subunit. | Putative transmembrane protein. | 0.773 |
EIO_1622 | nrdI | EIO_1622 | EIO_1620 | Ribonucleoside-diphosphate reductase, beta subunit. | nrdI protein. | 0.999 |
EIO_1623 | EIO_1619 | EIO_1623 | EIO_1619 | Putative transmembrane protein. | Glutaredoxin. | 0.532 |
EIO_1623 | EIO_1621 | EIO_1623 | EIO_1621 | Putative transmembrane protein. | Ribonucleoside-diphosphate reductase, alpha subunit. | 0.769 |
EIO_1623 | EIO_1622 | EIO_1623 | EIO_1622 | Putative transmembrane protein. | Ribonucleoside-diphosphate reductase, beta subunit. | 0.773 |
EIO_1623 | nrdI | EIO_1623 | EIO_1620 | Putative transmembrane protein. | nrdI protein. | 0.762 |
EIO_2725 | EIO_1621 | EIO_2725 | EIO_1621 | Glutaredoxin. | Ribonucleoside-diphosphate reductase, alpha subunit. | 0.917 |
EIO_2725 | nrdI | EIO_2725 | EIO_1620 | Glutaredoxin. | nrdI protein. | 0.747 |
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