STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1638Transporter, MscS family. (746 aa)    
Predicted Functional Partners:
EIO_1637
MscS Mechanosensitive ion channel.
     0.981
EIO_1639
Putative cysteine synthase A.
       0.786
trgB
Tellurite resistance protein TrgB.
 
     0.713
cfa
Cyclopropane-fatty-acyl-phospholipid synthase CfaS.
       0.665
EIO_2111
Conserved hypothetical protein.
 
     0.646
EIO_2679
Conserved hypothetical protein.
  
     0.632
EIO_2769
Exonuclease-like protein.
  
     0.614
EIO_0579
Conserved hypothetical protein.
 
     0.553
EIO_1563
Outer membrane chaperone Skp.
  
     0.525
EIO_1361
Possible peptidoglycan binding protein.
  
     0.479
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.