Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1680Organic solvent tolerance protein, putative. (711 aa)    
Predicted Functional Partners:
EIO_1678
Putative permease, YjgP/YjgQ family.
 
 
 0.992
EIO_1679
Putative permease.
 
 
 0.990
EIO_2688
ABC transporter, ATP-binding protein.
 
 
 0.898
EIO_2687
OstA-like protein.
 
 
 0.869
EIO_2789
Twin-arginine translocation pathway signal.
  
   
 0.815
EIO_1564
Putative outer membrane protein.
  
  
 0.803
EIO_2495
Putative capsule polysaccharide exporter.
  
  
 0.799
EIO_1019
ABC transporter, ATPase subunit.
     
  0.773
EIO_1020
Putative ABC transporter, inner membrane subunit.
     
  0.773
EIO_0720
TonB-dependent receptor.
     
 0.768
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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