STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1753Conserved hypothetical protein. (121 aa)    
Predicted Functional Partners:
EIO_1754
NADH-ubiquinone oxidoreductase.
       0.845
clpX
ATP-dependent protease ATP-binding subunit.
       0.784
EIO_2633
Conserved hypothetical protein.
  
     0.682
EIO_0188
Conserved hypothetical protein.
  
     0.561
EIO_0872
Conserved hypothetical protein.
  
     0.541
EIO_0095
ATP synthase F0, B' subunit.
  
     0.514
EIO_2678
HemY domain protein.
  
     0.504
EIO_0186
Conserved hypothetical protein.
  
     0.496
EIO_2106
Transcriptional regulator, LysR family protein.
  
     0.467
EIO_0189
Conserved hypothetical protein.
  
     0.462
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.