Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1775Putative membrane protein. (325 aa)    
Predicted Functional Partners:
EIO_1776
Conserved hypothetical protein.
 
  
 0.994
truA
tRNA pseudouridine synthase A.
       0.714
EIO_2678
HemY domain protein.
  
     0.646
cycH
Cytochrome c-type biogenesis protein CycH.
  
     0.583
EIO_1076
Invasion associated locus B family protein.
  
     0.580
EIO_0396
Conserved hypothetical protein.
  
     0.558
EIO_2679
Conserved hypothetical protein.
  
     0.555
EIO_2477
Outer membrane protein.
  
     0.545
hisZ
ATP phosphoribosyltransferase regulatory subunit.
  
     0.500
EIO_1723
Outer membrane protein.
  
     0.499
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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