Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1789MCP methyltransferase, CheR-type. (271 aa)    
Predicted Functional Partners:
EIO_1784
CheB methylesterase.
  
 0.999
EIO_1788
CheW protein.
 
 
 0.998
EIO_1787
CheA signal transduction histidine kinase.
 
 
 0.997
EIO_1782
Methyl-accepting chemotaxis protein McpC.
 0.993
mcpB
Methyl-accepting chemotaxis protein McpB.
 0.990
cheD
CheD.
  
 0.975
EIO_1790
Response regulator receiver domain-containing protein.
 
  
 0.949
cheY1
Chemotaxis two-component response regulator protein.
 
  
 0.906
EIO_2429
OmpA/MotB.
  
  
 0.904
EIO_2427
Flagellar hook-associated protein.
  
  
 0.899
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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