Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIO_18073-hydroxybutyrate dehydrogenase type 2. (250 aa)    
Predicted Functional Partners:
EIO_1808
Putative alpha/beta hydrolase fold family protein.
  
  0.812
EIO_1806
Probable L-aspartate dehydrogenase.
  
    0.773
EIO_1845
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein.
  
     0.765
yxnA
Oxidoreductase yxnA.
 
 
  0.744
EIO_1966
Oxidoreductase yxnA.
 
 
  0.728
EIO_1812
3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.703
EIO_2624
Oxidoreductase, short chain dehydrogenase/reductase family.
  
     0.703
EIO_0116
succinyl-CoA synthetase (ADP-forming) alpha subunit.
 
 
 
 0.699
EIO_2367
Short-chain dehydrogenase/reductase SDR.
 
 
  0.690
EIO_1809
2,3-diketo-L-gulonate-binding periplasmic protein.
       0.658
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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