Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1808Putative alpha/beta hydrolase fold family protein. (271 aa)    
Predicted Functional Partners:
EIO_2338
Isochorismatase.
 
 0.965
EIO_2339
Conserved hypothetical protein.
 
 
 0.928
EIO_1807
3-hydroxybutyrate dehydrogenase type 2.
  
  0.812
pdhB
Pyruvate dehydrogenase subunit beta.
   
 0.797
EIO_1806
Probable L-aspartate dehydrogenase.
       0.773
EIO_1814
Conserved hypothetical protein.
 
     0.767
EIO_1813
Putative NipSnap protein K02D10.1.
 
     0.684
EIO_1809
2,3-diketo-L-gulonate-binding periplasmic protein.
       0.658
EIO_1810
Sialic acid TRAP transporter permease protein siaT.
  
 
  0.642
EIO_1812
3-hydroxyacyl-CoA dehydrogenase.
   
 
 0.608
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.