STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1815Transcriptional regulator, GntR family. (234 aa)    
Predicted Functional Partners:
EIO_1811
Conserved hypothetical protein.
       0.776
EIO_1286
Transcriptional regulator, GntR family protein.
  
     0.775
EIO_1810
Sialic acid TRAP transporter permease protein siaT.
  
    0.775
EIO_1431
GntR family transcriptional regulator.
  
     0.774
EIO_1812
3-hydroxyacyl-CoA dehydrogenase.
       0.773
EIO_1813
Putative NipSnap protein K02D10.1.
       0.773
EIO_1814
Conserved hypothetical protein.
       0.773
EIO_0097
Pyruvate dehydrogenase complex repressor.
  
  
 0.704
EIO_1809
2,3-diketo-L-gulonate-binding periplasmic protein.
       0.702
EIO_0029
Transcriptional regulator, GntR family.
  
     0.671
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.